Dear Laure,have a look atÂ
https://github.com/galaxyproject/tools-devteam/blob/master/tools/bowtie_wrappers/bowtie_wrapper.xml
Cheers,Nicola
-- Messaggio originale--Da: Laure QUINTRICData: gio 15 feb 2018 16:06A:
galaxy-dev@lists.galaxyproject.org;CC: Patrick Durand;Olivier
Inizan;Oggetto
Dear list,
Is there somewhere in the Galaxy any running example of a planemo test
embracing a from_data_table option ?
We are trying to reproduce the picard example referenced here:
https://github.com/jmchilton/picard/commit/4df8974384081ee1bb0f97e1bb8d7f935ba09d73#diff-4145b3df5cbab370b2450e3
Hi Jochen,
I ran in to this yesterday, we're working on fixing it right now. It's due
to this:
https://github.com/bioconda/bioconda-recipes/issues/5430
And because Galaxy's converters use the `ucsc_tools` IUC conda metapackage,
which still points to the old versions. I have an update here:
http
Hi,
how can I fix this problem?
bedGraphToBigWig: error while loading shared libraries: libmysqlclient.so.18:
cannot open shared object file: No such file or directory
I have the files in the local bin but somehow it does not work inside galaxy.
Thanks in advance.
Cheers
Jochen
_
Hello Nate
Thanks for looking into this so quickly - I've manually applied the patch in
your PR for toolshed.yml.sample and that works perfectly, thanks!
Re picking up older .ini config files for a toolshed instance: what I was doing
was spinning up a completely new pair of Galaxy and toolshed