[galaxy-dev] Release of Galaxy 18.01

2018-03-19 Thread Martin Čech
Dear Galaxy Fans, The release of Galaxy 18.01 is out. Thanks to the Galaxy committers and you, our community! Full release notes: https://docs.galaxyproject.org/en/release_18.01/releases/18.01_announce.html *Highlights:* *Performance and User Experience Improvements* We made Galaxy more lively

Re: [galaxy-dev] tool dependencies

2018-03-19 Thread John Chilton
On Thu, Nov 16, 2017 at 12:01 PM, Matthias Bernt wrote: > Hi all, > > I tried to install velvetoptimizer (for the assembly tutorial in the GTN). > > It lists velvetoptimiser as requirement in the main xml and the > tool_dependencies.xml (listing the installation steps). Now there

Re: [galaxy-dev] Problems installing Galaxy 18.01

2018-03-19 Thread Peter van Heusden
First to answer your questions: I'm on release_18.01 branch, commit c58ca749c26bbb3c4ca8750f2c37fd1bb6bd7999. Thanks for the note about nginx-extras, I've installed that and it fixes the upload directives problem. Then on to the main problem. I used "Get Data" as the default location because

Re: [galaxy-dev] Problems installing Galaxy 18.01

2018-03-19 Thread Marius van den Beek
Hi Peter, does the tool show up in the tool panel (Looks like you've installed it into "Get Data")? What commit are you on ? There were some last minute bugfixes to the release_18.01 prior to the release, so if the checkout is a few days old an upgrade (and an uninstall/install cycle) might help.