[galaxy-dev] Ansible & Docker

2016-06-21 Thread mark fernandes (IFR)
Given the usage of Ansible & Docker by this group - this may prove interesting. Ansible Container is undergoing rapid development. For now, Ansible Container can only be installed from source. See INSTALL.md for details. https://www.helpnetsecurity.com/2016/06/20/ansible-native-container-workfl

Re: [galaxy-dev] LDAP authentication

2016-06-03 Thread mark fernandes (IFR)
Don't know if this helps or not but here's the link to Novell's entry on LDAP support for eDirectory https://www.novell.com/documentation/edir873/?page=/documentation/edir873/edir873/data/h007.html Mark Fernandes T: +44 (0)1603 255000 Institute of Food Research, No

Re: [galaxy-dev] Puzzling error in program using Bioblend

2015-10-09 Thread mark fernandes (IFR)
And it’s Nicola for the win…! I deleted the two tabular files and re-uploaded them and my code works! ☺ Following on from this does this error state happen very often or have I just been unlucky? If the former is true, any suggestions on how best to trap it and report back to user to fix? Than

[galaxy-dev] Puzzling error in program using Bioblend

2015-10-08 Thread mark fernandes (IFR)
Hi, I'm hoping that the list can help me out. I'm trying to write some tools to capture elements to ease migration from a course development server to a training server. I'm using the Bioblend API which I am a newbie at using. In the code for extracting the data files from shared data l

[galaxy-dev] Automated training environments - was Re: 20 August GalaxyAdmins Meetup: Genomic Data

2015-08-21 Thread mark fernandes (IFR)
Thanks Bjorn, Have already pulled a few of your Docker containers (And have been learning an awful lot from your Github code & the BioBlend source) Will try and get further with this later (My Docker machine is being restored from backup and on my desktop Kitematic is hanging at 99% - obviously

Re: [galaxy-dev] 20 August GalaxyAdmins Meetup: Genomic Data Management; Tool Installation Automation

2015-08-20 Thread mark fernandes (IFR)
Sounds like this will be an interesting meeting and quite germane to a requirement of mine. I want to achieve an environment as follows: 1) Galaxy Docker container (Thanks Bjorn :-) )with minimal tools deliverable to course developers machine e.g. via Kitematic 2) Course developer adds minimal s