Hi Miuki Yip,
repositories installed from Tool Shed will be physically present on a path
defined in the config/shed_tool_conf.xml file. Look for a line looking like
this: . The tool_path specifies path to
the repositories.
If the repository has tool dependencies installed as a Tool Shed packages
Hi all,
When a tool is installed onto Galaxy via the GUI from the ToolShed, where is
the tool itself installed on the system?
For instance, having installed Bed Tools from the ToolShed, the tool errors out
on a run with the following error:
Fatal error: Exit code 127 ()
/galaxy/database/job_wo
