Re: [galaxy-dev] Galaxy for Natural Language Processing

Hi Björn and Nicola, You can expect NLP tools on the ToolShed sometime in the (near?) future. Our project [1] shares funding sources with Galaxy (NSF SI2) and the NSF loves this kind of cross-domain collaboration. I also know of at least one other NLP project [2] that uses Galaxy that would li

Re: [galaxy-dev] Galaxy for Natural Language Processing

On 24.04.2015 03:18, Keith Suderman wrote: Hi Björn, On Apr 22, 2015, at 8:00 AM, Björn Grüning > wrote: Do you have a beer preference? Outing: I'm one of the rare Germans that do not drink alcohol ;) That must be awkward ;) :) This can be done via

Re: [galaxy-dev] Galaxy for Natural Language Processing

Il 24.04.2015 03:18 Keith Suderman ha scritto: This can be done via the ToolShed. I assume your custom command interpreter is not different than python or perl as interpreter? One difference is that my interpreter is a Java program. I likely should have mentioned that little detail... anyone w

Re: [galaxy-dev] Galaxy for Natural Language Processing

Hi Björn, On Apr 22, 2015, at 8:00 AM, Björn Grüning wrote: >> Do you have a beer preference? > > Outing: I'm one of the rare Germans that do not drink alcohol ;) That must be awkward ;) > This can be done via the ToolShed. I assume your custom command > interpreter is not different than p

Re: [galaxy-dev] Galaxy for Natural Language Processing

Hi Keith, Am 21.04.2015 um 21:21 schrieb Keith Suderman: > On Apr 15, 2015, at 5:35 AM, Björn Grüning wrote: > >> Nice! Can I convince you to put these tools into the TS if everything is >> working? Maybe with a German beer? ;) > > Do you have a beer preference? Outing: I'm one of the rare G

Re: [galaxy-dev] Galaxy for Natural Language Processing

On Apr 15, 2015, at 5:35 AM, Björn Grüning wrote: > Nice! Can I convince you to put these tools into the TS if everything is > working? Maybe with a German beer? ;) Do you have a beer preference? We will definitely share our tools when they are stable, either on the public tool shed or we wi

Re: [galaxy-dev] Galaxy for Natural Language Processing

Hi Keith, > Hi Björn, > > Thanks for the quick reply. > > It might help to take a look at what I have so far. Our Galaxy server is > running at http://grid.anc.org:8000 > The front page contains a very basic tutorial (and I use the term loosely) > with instructions for creating a simple wor

Re: [galaxy-dev] Galaxy for Natural Language Processing

Hi Björn, Thanks for the quick reply. It might help to take a look at what I have so far. Our Galaxy server is running at http://grid.anc.org:8000 The front page contains a very basic tutorial (and I use the term loosely) with instructions for creating a simple workflow with our tools. The "

Re: [galaxy-dev] Galaxy for Natural Language Processing

Hi Keith, Am 13.04.2015 um 20:12 schrieb Keith Suderman: > Hello, > > Our group is investigating using Galaxy as a workflow engine for NLP (Natural > Language Processing) tasks. Good choice! :) > I have installed a local Galaxy instance and created wrappers for the > services we use and so f

[galaxy-dev] Galaxy for Natural Language Processing

Hello, Our group is investigating using Galaxy as a workflow engine for NLP (Natural Language Processing) tasks. I have installed a local Galaxy instance and created wrappers for the services we use and so far everything is working great. I do have a few questions and they all fall under the “