I have occasionally seen this.
GNU-coreutils hangs while compiling on ubuntu 14.04 ... there is a
`nanosleep` in the configure step,
which is never returning.
"checking for working nanosleep..."
https://bugs.launchpad.net/ubuntu/+source/coreutils/+bug/1079889
Just kill the process (this will happen
Ok, second attempt, perl install died with the same error, so I suspect
you're right about the cause. Eric?
Peter
On 22 February 2016 at 11:41, Peter van Heusden wrote:
> Thanks Peter
>
> I managed, on the second attempt, to get past the gnu coreutils problem.
> Zipho noticed a weird lockup tho
Thanks Peter
I managed, on the second attempt, to get past the gnu coreutils problem.
Zipho noticed a weird lockup though: conftest that seemed to be from the
gnu coreutils install wanted to listen on port 4001, which is the same port
our uwsgi server listens on. The install has now completed but
Forgot to 'reply-to-list', sorry:
Hi Peter
I think that package_perl_5_18 in the tool shed is broken, I came across
the same error last week on both our production instance and a local
'test' instance (both v15.10).
My suspicion is that the following lines are to blame:
...
Hi there Eric and others
I tried to install the JBrowse tool on a dev branch server running on an
Ubuntu 14.04 VM.
It got stuck at the package_gnu_coreutils_8_22 dependency (revision
ac64dfe4b1fb)
- this ended up in "Installing tool dependencies" state.
If I go look at the tool details it highli
