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Date: Thu, 11 Jan 2018 09:44:10 +0100
From: Björn Grüning
To: Matthias Enders ,
"galaxy-dev@lists.galaxyproject.org"
Cc: Fabian Kaiser
Subject: Re: [galaxy-dev] Problem with dependencies: Conda/freebayes
Message-ID: <2b047e78-2a48-02e2-b413-8c597d0d5...@gmail.com>
Hello,
Did the suggested help from Biostars help?
https://biostar.usegalaxy.org/p/26197/
Thanks!
Jen
--
Jennifer Hillman-Jackson
Galaxy Application Support
http://usegalaxy.org
http://galaxyproject.org
http://biostar.usegalaxy.org
On Wed, Jan 3, 2018 at 6:01 AM, Matthias Enders <
m.end...@ger
This is presumably the same question elsewhere:
https://biostar.usegalaxy.org/p/26197/
--
Devon Ryan, Ph.D.
Email: dpr...@dpryan.com
Data Manager/Bioinformatician
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51
79108 Freiburg
Germany
On Thu, Jan 11, 2018 at 9:44 AM, Björn Grünin
Hi Matthias,
sorry for answering so late!
Do you have any error message from the logs during installation?
What means it is not recognised by Galaxy?
Do you see the conda environment in /tool_deps/_conda/ ?
Is freebayes crashing?
Ciao,
Bjoern
Dear Galaxy Dev Mailing List,
We encountered a
Dear Galaxy Dev Mailing List,
We encountered a problem while installing freebayes and its via Tool Shed.
Galaxy installed correctly freebayes (1.1.0.46); samtools (0.1.19); gawk
(4.1.3) (all have the Current Installation Status "Installed through Conda")
but then failed on the last dependency "
