Re: [galaxy-dev] Puzzling error in program using Bioblend

2015-10-09 Thread mark fernandes (IFR)
And it’s Nicola for the win…! I deleted the two tabular files and re-uploaded them and my code works! ☺ Following on from this does this error state happen very often or have I just been unlucky? If the former is true, any suggestions on how best to trap it and report back to user to fix? Than

Re: [galaxy-dev] Puzzling error in program using Bioblend

2015-10-08 Thread Nicola Soranzo
Hi Mark, it seems that one dataset in the library (probably /usr/users/fr009/fernande/gal_exports/data/Intro Galaxy Training/Getting_started/NBARC/NB_domains.tabular ) is in 'error' state, so BioBlend, as a precaution, refuses to download it, even if it is possible to download it in Galaxy.

[galaxy-dev] Puzzling error in program using Bioblend

2015-10-08 Thread mark fernandes (IFR)
Hi, I'm hoping that the list can help me out. I'm trying to write some tools to capture elements to ease migration from a course development server to a training server. I'm using the Bioblend API which I am a newbie at using. In the code for extracting the data files from shared data l