Re: [galaxy-dev] packaging R scripts

I will update this post with more informations as needed: https://biostar.usegalaxy.org/p/16259/ Thanks, Bjoern Am 26.02.2016 um 09:37 schrieb Gildas Le Corguillé: > Hi, > > For me, three solutions : > - You can find existing packages which will install your library >

Re: [galaxy-dev] packaging R scripts

Hi Xianrong and Gildas, this method works, but is a little bit outdated. Please use the setup_r_environment like used here: https://github.com/galaxyproject/tools-iuc/blob/master/packages/package_deseq2_1_8_2/tool_dependencies.xml You can use this script with small modifications to create you

Re: [galaxy-dev] packaging R scripts

Hi, For me, three solutions : - You can find existing packages which will install your library (https://testtoolshed.g2.bx.psu.edu/view/jeltje/package_dnacopy_1_40_0/118417199f06 ). So you will just need to

[galaxy-dev] packaging R scripts

Hi, I am trying to package an R script (that requires certain R packages) into a galaxy tool. Any advice would be deeply appreciated! I have tested it on planemo and it works. When I tried the version I uploaded onto the toolshed, I got an error saying that the R packages do not exist. I