Re: [galaxy-user] Cufflinks quartile normalization

2011-08-27 Thread Jeremy Goecks
===> Please use "Reply All" when responding to this email! <=== David, Quartile normalization is explained in the Cufflinks manual: http://cufflinks.cbcb.umd.edu/manual.html -- "With this option, Cufflinks normalizes by the upper quartile of the number of fragments mapping to individual loci

[galaxy-user] galaxy test-data organization

2011-08-27 Thread Joseph Hargitai
===> Please use "Reply All" when responding to this email! <=== Hi, is there by any chance a per application breakdown of the test-data structure? best, joe ___ The Galaxy User list should be used for the discussion of Galaxy analysis an