[galaxy-user] output file

2012-02-12 Thread La Chi
Hi , i have added a tool to the galaxy and it is showing me the desired result on history panel when I execute, now i have added another tool and i want to show its result on the same file which was the output of my first tool . here is the relative code of both python and xml file thanks def

Re: [galaxy-user] Large local file of NGS for FASTAQ Groomer

2012-02-12 Thread Peter Cock
On Sun, Feb 12, 2012 at 10:28 PM, Arthur Zheng haoz...@gmail.com wrote: Hi, I have downloaded and installed a local instance of galaxy on the linux server using my user account according to here: http://main.g2.bx.psu.edu/ Then I ran the following command: sh run.sh and accessed galaxy

Re: [galaxy-user] Large local file of NGS for FASTAQ Groomer

2012-02-12 Thread Arthur Zheng
On Sun, Feb 12, 2012 at 4:34 PM, Peter Cock p.j.a.c...@googlemail.comwrote: On Sun, Feb 12, 2012 at 10:28 PM, Arthur Zheng haoz...@gmail.com wrote: Hi, I have downloaded and installed a local instance of galaxy on the linux server using my user account according to here:

[galaxy-user] Is the result of galaxy tool (e.g. FastQ Groomer) automatically saved somewhere on a local linux server?

2012-02-12 Thread Arthur Zheng
Hi, I have downloaded and installed a local instance of galaxy on the linux server using my user account according to here: http://main.g2.bx.psu.edu/ I then created a library and linked some datasets on the local server. Then I ran FastQ Groomer on some datasets. The results were

Re: [galaxy-user] Is the result of galaxy tool (e.g. FastQ Groomer) automatically saved somewhere on a local linux server?

2012-02-12 Thread Enis Afgan
Hi Arthur, Any tools run on main.g2.bx... are only stored on that server and not on your local machine. By clicking on the Save icon (floppy disk) in your history item, you are able to transfer the data from the remote server to your local machine. As far as your local installation goes - the