Re: [galaxy-user] requirements

2012-06-08 Thread Jennifer Jackson
Hi Kevin, The starting place for local install set up is: http://getgalaxy.org There is a lot of information to consider when first getting started and one solution does not fit all, so we started wiki of known hardware configurations, and are encouraging the development community to add in t

[galaxy-user] requirements

2012-06-08 Thread McGowan, Kevin M.
Galaxy team, Where can I find information about the requirements for installing and running Galaxy on our campus. In particular, I'd like to know what type of computer or server I should purchase. Thanks Kevin McGowan Kevin McGowan Manager Molecular Biology and Cell Culture Shared Resources H

[galaxy-user] Question about Galaxy

2012-06-08 Thread Jennifer Jackson
Hi Qianli, It looks as if you are using the Extract DNA tool? GTF/GFF files have coordinates with a 1-based start position - and this was your input, but the output from this tool produces coordinates with a BED-style 0-based start position. The genome index files used by the tool are in .2b