> Is it possible to create a custom build and use it to view a SAM file without
> adding the .len and .2bit files in to the Galaxy file system as an
> administrator?
Yes, it definitely is.
> If so, what am I doing wrong?
This is a Galaxy bug which has been fixed in this commit:
https://bitbu
Hi Graham,
This tends to work best right now when the Custom build is created
first, then the dataset is assigned to that build. Create the build
under "User -> Custom Builds".
Also - just pick one dataset to represent the genome ( fasta or len ) -
fasta is a better choice when you have it.
Hi,
I’m struggling to figure out how to visualise a SAM file in Trackster as a
normal user (i.e. without admin privileges). I’ve tried both my local install
and use galaxy.org.
This is what I’ve done on usegalaxy.org:
Uploaded paired-end fastq sequences and a reference fasta file.
Mapped with BWA
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