Re: [galaxy-user] Large local file of NGS for FASTAQ Groomer

Dear Alex, Thank you for the reminder. I noticed that I am using illumina CASAVA 1.8. How can I make sure whether it is already in Sanger format or not? Arthur On Mon, Feb 13, 2012 at 4:53 AM, Bossers, Alex wrote: > Are you sure the fastq's are in older format? Otherwise you won't need to > gr

[galaxy-user] Is the result of galaxy tool (e.g. FastQ Groomer) automatically saved somewhere on a local linux server?

> Hi, > > I have downloaded and installed a local instance of galaxy on the linux > server using my user account according to here: > http://main.g2.bx.psu.edu/ > > I then created a library and linked some datasets on the local server. Then I ran FastQ Groomer on some datasets. The results

Re: [galaxy-user] Large local file of NGS for FASTAQ Groomer

On Sun, Feb 12, 2012 at 4:34 PM, Peter Cock wrote: > On Sun, Feb 12, 2012 at 10:28 PM, Arthur Zheng wrote: > > Hi, > > > > I have downloaded and installed a local instance of galaxy on the linux > > server using my user account according to here: > > http://main.

[galaxy-user] Large local file of NGS for FASTAQ Groomer

Hi, I have downloaded and installed a local instance of galaxy on the linux server using my user account according to here: http://main.g2.bx.psu.edu/ Then I ran the following command: > sh run.sh and accessed galaxy through the local firefox browser on the server http://localhost:8080 Now I am