Yao,
It's difficult to tell what's wrong without seeing your analysis. However, you
may want to use the reference annotation during the Cufflinks phase to either
estimate isoform expression or guide assembly (this option will appear on our
public server soon). Read the Cufflinks documentation t
Dear all:
Recently, I run cufflink in galaxy on the internet. I want to compare two
samples, However, I found no transcript or gene passed the significant
level, even many of them have large FPKM in one sample and 0 FPKM in another
sample.
Any thoughts?
Below is my cufflink process:
I have four
2 matches
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