Re: [galaxy-user] FASTQ splitter produced empty dataset, please help

2012-08-10 Thread Jennifer Jackson
Hello Jianguang, Your data is paired end, but it was already split into forward and reverse reads when extracted in FASTQ format from the SRA. The tool 'FASTQ splitter' is not needed (this tool literally cuts a joined sequence record into two). What you most likely want to do instead is sort

[galaxy-user] FASTQ splitter produced empty dataset, please help

2012-08-10 Thread Du, Jianguang
I have problem to split a paired-end FASTQ dataset into two separate datasets. In order to explain the problem clearly, I list the detail of what I did with my dataset: Step 1) My aim is to compare datasets for the differential alternative splicing. I downloaded paired-end datasets at FASTQ f