Re: [galaxy-user] Performing operations on tab delimited text files

2012-10-03 Thread Jennifer Jackson
Hello Lanelle, A combination of text manipulations can extract the data into interval format. A good step-by-step example, including a video tutorial, is in the Using Galaxy paper & supplemental available here: http://main.g2.bx.psu.edu/u/galaxyproject/p/using-galaxy-2012 Protocol #2 has exam

[galaxy-user] Performing operations on tab delimited text files

2012-10-03 Thread Lanelle Oni Edwards
Hi, My name is Lanelle Edwards. I am a new galaxy user. I uploaded a tab delimited text file to my history. However, the first column of the data I imported is solely chromosome number and start and end position (ALL IN ONE COLUMN) in the format chrI:100-200. My question is: How can I fi

Re: [galaxy-user] Performing operations on tab delimited text files

2011-12-16 Thread Luciano Cosme
Hi Lanelle, You can go in Text Manipulation and use the "Convert delimiters to TAB" or "Cut columns from a table" and play with it a bit until you get your data in the format you want. I used it sometime ago to manipulate data for other analysis, but I don't remember exactly how I did

[galaxy-user] Performing operations on tab delimited text files

2011-12-16 Thread Lanelle Oni Edwards
Hi, My name is Lanelle Edwards. I am a new galaxy user. I uploaded a tab delimited text file to my history. However, the first column of the data I imported is solely chromosome number and start and end position (ALL IN ONE COLUMN) in the format chrI:100-200. My question is: How can I fi