Chandu,
I've deleted my copy of your history to save space as your history was quite
large. Please rerun Cuffcompare with the modifications I suggested below.
Thanks,
J.
On Oct 13, 2011, at 4:26 PM, Chandu Galaxy wrote:
> Thank you very much Jeremy.
>
> Can I have a look at the re-ran dataset
Thank you very much Jeremy.
Can I have a look at the re-ran datasets?
On Thu, Oct 13, 2011 at 12:12 PM, Jeremy Goecks wrote:
> Chandu,
>
> There are two problems:
>
> (1) you mapped your reads to AgamP3, but the dbkeys for all of your
> Cufflinks datasets is anoGam1. This should not have happen
Chandu,
Are you running your analysis on our public server ( main.g2.bx.psu.edu )? If
so, can you share your history me please (Options-->Share/Publish-->Share with
a User-->my email address).
Thanks,
J.
On Oct 11, 2011, at 4:26 PM, Chandu Galaxy wrote:
> Thank you for the response.
> I can't
Thank you for the response.
I can't check my reference genome dataset because I'm using reference
provided by Galaxy (*Mosquito (Anopheles gambiae): AgamP3*). Is there any
solution? Thank you.
--
Chandu
On Mon, Oct 10, 2011 at 7:15 AM, Jeremy Goecks wrote:
>
> Tool execution generated the foll
> Tool execution generated the following error message:
> Error running cuffcompare. Warning: Your version of Cufflinks is not
> up-to-date. It is recommended that you upgrade to Cufflinks v1.1.0 to benefit
> from the most recent features and bug fixes (http://cufflinks.cbcb.umd.edu).
> No fasta
Hello,
I'm using Galaxy tool from about two months. I'm very new to this community.
I ran into some problems when using the tools for NGS: RNA Analysis. I would
like to get from the community. Here is the description of the problem.
I've four different datasets (fastqsanger format). I ran the NG
6 matches
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