Re: [galaxy-user] Read_group_tracking files are not enough for cummerbund visualisations on replicates?

2013-11-20 Thread Jennifer Jackson
Hello Elihu, The tool was just recently upgraded to include these files. https://trello.com/c/FdUYdbIn The update will be available in the Tool Shed then updated on the main public server at (or possibly before) the next stable release. Other pending updates to the tool suite include adding t

[galaxy-user] Read_group_tracking files are not enough for cummerbund visualisations on replicates?

2013-11-20 Thread Aranday Cortes, Elihu
Hi, Cuffdiff in Galaxy produces "read_group_tracking" files. However, I wonder if these files are enough when using 'replicates=T' in cummeRbund or I also need "read_groups.info" and "run.info" files in myDir. I've tried 'replicates(cuff)' with the 'read_group_tracking' files in my directory a