Re: [galaxy-user] Regarding perl script

2011-10-18 Thread Daniel Blankenberg
Hi Shambhavi, It sounds like your tool_conf.xml file is malformed. Check that you have proper quotes and that the tag open and close are all correct, etc. There are several programs out there that can validate xml files for you, you may wish to try to validate your xml file with one of those.

[galaxy-user] Regarding perl script

2011-10-18 Thread Shambhavi Srivastava
Hello all, I am a new to GALAXY and am trying to create my own workflow with my own scripts written in PERL and integrating it with few already available in GALAXY. I tried the basic example given in GALAXYwiki..the program about counting GC content. I followed all the steps mentioned but when I s