Re: [galaxy-user] should I run FASTQ Groomer?

Hello Jianguang, Given this information, you will not need to run FASTQ Groomer, but simply proceed with Fastqc and FASTQ Trimmer. Best, Jen Galaxy team On 8/14/12 11:12 AM, Du, Jianguang wrote: Dear All, I have some FASTQ datasets in phred 33 offset, and I have already assinged them Fastq

[galaxy-user] should I run FASTQ Groomer?

Dear All, I have some FASTQ datasets in phred 33 offset, and I have already assinged them Fastqsanger format. Do I need to run FASTQ Groomer on these datasets before I check the data quality by "Fastqc: Fastqc QC" and "FASTQ Trimmer by column" to remove bad nucleotides at 3' end of reads? Shou