Hello Dr. Shevtsov,
We are looking into your issue and will get back to you shortly.
Best regards,
Pauline Fujita
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu
On 06/01/11 05:47, Sergei Shevsov wrote:
> Hello:
> not long time ago I use http://genome.ucsc.edu/cgi-bin/hgGateway,
> to g
Hi Shamsher,
I'm sorry, but I am having trouble understanding your question. Do you
want to obtain a list of only the TSS you are interested in with
information about the gene? Or, do you want to get a list of all the TSS
with information about the genes?
Also, can you be more specific about w
Hi Aanchal,
Since rendering to pixels inherently loses precision, and the volume of data
for LD is quite large, our database table uses a lossy compression scheme for
those values, developed by Daryl Thomas. This scheme (details below) could be
reversed to get approximate/binned values for r^2
Hi Aanchal,
I double-checked and you are on the mail list. Your settings are such
that you will receive a "daily digest" (i.e. each day, all the genome
mail list emails will be bundled in single large). To change your
settings login at this page:
https://lists.soe.ucsc.edu/mailman/listinfo/gen
Thanks for your quick and detailed answer. this is the first time I have
recieved reply that quickly from your list
How will I get corresponding gene annotation. Is there any way that I can
get annottaion corresponding to TSS site ? Instead of looking at my selected
list I am downloading all the T
Kindly accept my request.
Regards
Aanchal
___
Genome maillist - Genome@soe.ucsc.edu
https://lists.soe.ucsc.edu/mailman/listinfo/genome
Dear Sir /Madam
For a certain set of SNPs I want to know which are the SNPs in LD with the
query SNPs and their r^2 values. The output that I am downloading from UCSC
tables, is giving me a table in which D prime values, r^2 and LOD scores are
represented in alphabets. I am unable to inertprate th
