> PS: the 5 first eigenvectors don't account for > 80% of the total motility,
> so could this be my problem?
>
>
> Thank you,
>
> Carla
>
--
Dr. Daniel Seeliger
Computational Biomolecular Dynamics Group
Max-Planck-Institute for Biophysical Chemistry
Tel. +49 (0) 551-201
>
> 7) Are there perhaps such amino acid variants already built?
>
>
>
> Finally, some technicalities:
>
>
>
> 8) I have seen the sc-alpha parameter (when sc-power = 1) given the
> values 1.0, 0.7 and 0.5. What is recommended?
>
> 9) Should I emplo
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