Re: [gmx-users] grompp error

2013-06-19 Thread Hasni Arsad
are getting are self-explanatory. You need to think > about why they are arising. Perhaps do some tutorials to get a feel for > normal workflows, and how best to modify them to suit your needs. > > Mark > > > On Tue, Jun 18, 2013 at 10:57 AM, Hasni Arsad > wrote: > &

Re: [gmx-users] grompp error

2013-06-19 Thread Hasni Arsad
Thanks On Tue, Jun 18, 2013 at 10:44 PM, massimo sandal wrote: > 2013/6/18 Hasni Arsad > > > What should i do with this error massage: > > > > Google it. > > > > Program grompp, VERSION 4.6.2 > > Source code file: > > /home/hasni/Bioinformat

Re: [gmx-users] grompp error

2013-06-18 Thread Hasni Arsad
our force > field. Over to you. :-) > > Mark > On Jun 18, 2013 5:23 AM, "Hasni Arsad" wrote: > > > Hi, > > > > I got this error massage when execute this command- grompp -f em.mdp -c > > solvated.pdb -p topol.top > > > > > > > >

[gmx-users] grompp error

2013-06-17 Thread Hasni Arsad
Hi, I got this error massage when execute this command- grompp -f em.mdp -c solvated.pdb -p topol.top Program grompp, VERSION 4.6.2 Source code file: /gromacs-4.6.2/src/kernel/toppush.c, line: 1336 Fatal error: Atomtype NPYL not found For more information and tips for troubleshooting, plea