Re: [gmx-users] CHARMM36 lipid bilayers

2010-10-22 Thread Sven Jakobtorweihen
mention. This will be discussed in a paper which we hope to have published fairly soon. Cheers Tom Sven Jakobtorweihen wrote: Dear gmx-users, recently Pär Bjelkmar and Thomas Piggot have generated force field files for Charmm36 lipids. I run some simulations to find the best

Re: [gmx-users] CHARMM36 lipid bilayers

2010-10-22 Thread Sven Jakobtorweihen
of area per lipid for both POPC and DPPC compared to both the Klauda paper (CHARMM results) and experiment. Cheers Tom Sven Jakobtorweihen wrote: Hi there, Tom, thanks for this hint, yes, that is an improvement. I am looking forward to your paper. Berk, I am using switch for vdw

[gmx-users] CHARMM36 lipid bilayers

2010-10-21 Thread Sven Jakobtorweihen
Dear gmx-users, recently Pär Bjelkmar and Thomas Piggot have generated force field files for Charmm36 lipids. I run some simulations to find the best run parameters and to check if the results of the original Charmm36 lipid article [Klauda et al., J. Phys Chem. B, 2010, 114, 7830) can be