Re: [gmx-users] SPC density

2011-12-28 Thread Theodora García
:18503.2 bar I guess I should get 1000 g/cm^3 Any other suggestion? On Tue, Dec 27, 2011 at 6:23 PM, David van der Spoel sp...@xray.bmc.uu.sewrote: On 2011-12-27 17:57, Theodora García wrote: Dear all I am starting some MD simulations aimed to calculate the volume of a solute in water

Re: [gmx-users] SPC density

2011-12-28 Thread Theodora García
... perhaps 0.978 is not so bad? On Wed, Dec 28, 2011 at 9:34 AM, Theodora García theodoraaagar...@gmail.com wrote: Thank you very much for your advice... I have tried including dispcorr = enerpres in my mdp file and the density increased a bit in a timescale of 5 ns but it is still far from

[gmx-users] SPC density

2011-12-27 Thread Theodora García
Dear all I am starting some MD simulations aimed to calculate the volume of a solute in water as a function of the concentration. First I ran a simulation of a box with 4124 SPC water molecules (similar number of molecules that will be later used with my solute) for which I got the following