Re: [gmx-users] QMMM

2011-03-09 Thread Txema Mercero
I did follow the Gaussian/Gromacs QM/MM set up guide too and was not successful. On Tue, Mar 8, 2011 at 1:28 PM, Jack Shultz wrote: > Good luck. I followed the instructions and was not successful. > > On Tue, Mar 8, 2011 at 12:48 AM, Haresh wrote: >> >> Hello everyone, >> >> I want install groma

Re: [gmx-users] GAUSSIAN Error message

2011-02-25 Thread Txema Mercero
> # HF/6-31G OPT FREQ ^M ^M ARGUSLAB-GENERAT Could be related to the ^M ^M characters? This sometimes happens when you transfer files form windows to linux. You may try "dos2unix" On Thu, Feb 24, 2011 at 8:07 PM, Sergio Manzetti wrote: > No. It contains a charged Gandolinium ion in the middle o

Re: [gmx-users] R. Re: Re: gromacs QM/MM compilation with gaussian (Txema Mercero) (Txema Mercero)

2011-02-17 Thread Txema Mercero
gt; For more information and tips for troubleshooting, please check the GROMACS > website at http://www.gromacs.org/Documentation/Errors > ------- > > "I Used To Care, But Things Have Changed" (Bob Dylan) > > On 02/17/2011 10:39 AM, Txema Mercero wrote: >> >> Here

Re: [gmx-users] R. Re: Re: gromacs QM/MM compilation with gaussian (Txema Mercero) (Txema Mercero)

2011-02-17 Thread Txema Mercero
Here it goes. On Thu, Feb 17, 2011 at 9:49 AM, Gerrit Groenhof wrote: >>   2. Re: Re: gromacs QM/MM compilation with gaussian (Txema >>      Mercero) (Txema Mercero) > > Can you send me your tpr file? > > Gerrit > > -- > gmx-users mailing list    gmx-users@groma

Re: [gmx-users] Re: gromacs QM/MM compilation with gaussian (Txema Mercero)

2011-02-17 Thread Txema Mercero
rrit > On 16 Feb 2011, at 14:39, Txema Mercero wrote: > >> I get the same error which I attach this time: >> >> >> >> - >> Back Off! I just backed up md.log to ./#md.log.8# >> Reading file topol.tpr, VERSION 4.5.3 (single

Re: [gmx-users] Re: gromacs QM/MM compilation with gaussian (Txema Mercero)

2011-02-16 Thread Txema Mercero
gt; > Gerrit > >> >>   1. Re: gromacs QM/MM compilation with gaussian (Txema Mercero) >>   2. Re: Periodic Boundary Conditions g_mindist -pi (ifat shub) >>   3. Re: Re: Periodic Boundary Conditions g_mindist -pi (Mark Abraham) >> >> >>

[gmx-users] Re: gromacs QM/MM compilation with gaussian

2011-02-16 Thread Txema Mercero
. Where should GAUSS_EXE and GAUSS_DIR point exactly? Thanks for your attention, any help will be appreciated. Regards, Txema Mercero IZO/SGI UPV/EHU -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http