[gmx-users] installing gromacs 4.6.1 with openmpi

2013-11-07 Thread niloofar niknam
Dear gromacs users I have installed gromacs 4.6.1 with cmake 2.8.12, fftw3.3.3 and openmpi-1.6.4 on a single machine with 8 cores(Red Hat Enterprise linux 6.1) . During openmpi installation ( I used "make -jN") and also in gromacs installation ( I used "make -j N" command), everything seemed ok

[gmx-users] Failure in MD run without any error

2013-10-28 Thread niloofar niknam
 DearGromacs users I have encountered something strange. I have installed Red Hat Enterprise Linux 6.1 & 6.2 on two machines recently and then lam 7.1.4, fftw 3.3.2 and Gromacs 4.5.5 . During linux installation, everything went well I didn`t face any complain or receiving any error, as well as in