cs.org [gmx-users-boun...@gromacs.org]
on behalf of Mark Abraham [mark.abra...@anu.edu.au]
*Sent:* Tuesday, January 31, 2012 7:09 PM
*To:* Discussion list for GROMACS users
*Subject:* Re: [gmx-users] A query
On 31/01/2012 9:04 PM, Anik Sen wrote:
Hello,
Am anik. Am using gromacs 4.5.5
I could not
___
From: gmx-users-boun...@gromacs.org [gmx-users-boun...@gromacs.org] on behalf
of Mark Abraham [mark.abra...@anu.edu.au]
Sent: Tuesday, January 31, 2012 7:09 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] A query
On 31/01/2012 9:04 PM, Anik Sen wrote:
Hello,
On 31/01/2012 9:04 PM, Anik Sen wrote:
Hello,
Am anik. Am using gromacs 4.5.5
I could not find the proper reason of the foillowig failure of my job.
please help.
*The following is a part of the dna pdb file, which I am using:
*ATOM 1 O5' DG5 X 1 13.663 36.760 21.465 0.00 0.0
Hello,
Am anik. Am using gromacs 4.5.5
I could not find the proper reason of the foillowig failure of my job. please
help.
The following is a part of the dna pdb file, which I am using:
ATOM 1 O5' DG5 X 1 13.663 36.760 21.465 0.00 0.00
ATOM 2 C1' DG5 X 1 14
On 27/01/2012 9:50 PM, Anik Sen wrote:
Hello,
Am anik. Am using gromacs 4.5.5
I could not find the proper reason of the foillowig failure of my job.
please help.
The following is a part of the dna pdb file, which I am using:
ATOM 1 OH DG5 X 1 13.663 36.760 21.465 0.
Hello,
Am anik. Am using gromacs 4.5.5
I could not find the proper reason of the foillowig failure of my job. please
help.
The following is a part of the dna pdb file, which I am using:
ATOM 1 OH DG5 X 1 13.663 36.760 21.465 0.00 0.00
ATOM 2 CT DG5 X 1 1
Mark Abraham [mark.abra...@anu.edu.au]
*Sent:* Tuesday, January 24, 2012 3:19 PM
*To:* Discussion list for GROMACS users
*Subject:* Re: [gmx-users] a query
On 24/01/2012 8:32 PM, Anik Sen wrote:
Hello Anik here.
I think its a silly question but, could not stop to ask as its
between me and my
...@gromacs.org] on behalf
of Mark Abraham [mark.abra...@anu.edu.au]
Sent: Tuesday, January 24, 2012 3:19 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] a query
On 24/01/2012 8:32 PM, Anik Sen wrote:
Hello Anik here.
I think its a silly question but, could not stop to ask as its between
On 24/01/2012 8:32 PM, Anik Sen wrote:
Hello Anik here.
I think its a silly question but, could not stop to ask as its between
me and my gromacs job.
I am using gromacs 4.5.5. I want to run a dynamics run with DNA. I
made a pdb file from vmd software. But the residue file its showing is
"MOL"
Hello Anik here.
I think its a silly question but, could not stop to ask as its between me and
my gromacs job.
I am using gromacs 4.5.5. I want to run a dynamics run with DNA. I made a pdb
file from vmd software. But the residue file its showing is "MOL". There is no
residue type named mol. So
- Original Message -
From: oguz gurbulak
Date: Friday, June 18, 2010 21:36
Subject: [gmx-users] a query about analysis
To: gmx-users@gromacs.org
---
| - - - > Dear All,
I study on molecular dynamics simulations
There are many programs you could use for large data sets, although
I'm not sure how many of them belong to the "excel-like" category.
Personally, I'm quite happy with Matlab and its free-counterpart,
Octave. Both of them can quite easily be made to read matrices and
xvg-files. They are muc
oguz gurbulak skrev:
Dear All,
I study on molecular dynamics simulations of organic molecules. I want
to learn that Is there an excel-like program that accepts more data
set ( for instance output info for 5000 records ) in order to make
analysis ? Could you please give me some suggestions
Dear All,
I study on molecular dynamics simulations of organic molecules. I want to
learn that Is there an
excel-like program that accepts more data set ( for instance output info for
5000
records ) in order to make analysis ? Could you please give me some suggestions
about this issue ?
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