From: Justin A. Lemkul jalem...@vt.edu
To: Discussion list for GROMACS users gmx-users@gromacs.org
Sent: Wednesday, June 6, 2012 4:08 PM
Subject: Re: [gmx-users] Atomtype OW_tip4p not found
On 6/6/12 7:36 AM, Amir Abbasi wrote
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*Sent:* Wednesday, June 6, 2012 3:58 PM
*Subject:* Re: [gmx-users] Atomtype OW_tip4p not found
On 6/6/12 7:19 AM, Amir Abbasi wrote:
Hi!
I use tleap to generate topology file of a RNA molecule
Hi!
I use tleap to generate topology file of a RNA molecule with parmbsc0 ff. Then
I generate .gro and .top files of that with amb2gmx.pl.
I'm manually add this lines to .top file
; Include water topology
#include amber99sb.ff/tip4p.itp
; Include topology for ions
#include
On 6/6/12 7:19 AM, Amir Abbasi wrote:
Hi!
I use tleap to generate topology file of a RNA molecule with parmbsc0 ff. Then I
generate .gro and .top files of that with amb2gmx.pl.
I'm manually add this lines to .top file
; Include water topology
#include amber99sb.ff/tip4p.itp
; Include topology
:58 PM
*Subject:* Re: [gmx-users] Atomtype OW_tip4p not found
On 6/6/12 7:19 AM, Amir Abbasi wrote:
Hi!
I use tleap to generate topology file of a RNA molecule with parmbsc0 ff.
Then I
generate .gro and .top files of that with amb2gmx.pl http://amb2gmx.pl.
I'm manually add this lines
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