Hi Giovanni,
Rather than me just provide you with an mdp file I would suggest that
you go through the Klauda paper with a copy of the online GROMACS mdp
options open (http://manual.gromacs.org/online/mdp_opt.html). This way
you should be able to work out what the appropriate setting are yourse
Dear Tom,
Thank you very much for your answer. I am aware of the paper you suggested
but it is not clear for all mdp parameters. My intent is the simulation of a
small organic molecule into the DPPC membrane making use of the CHARMM36 force
field. There are significant differences when I c
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