Re: [gmx-users] Density histogram in Ramachandran plot

2009-11-13 Thread Anthony Cruz Balberdi
Here in the gromacs user contribution: http://www.gromacs.org/index.php?title=Download_%26_Installation/User_contributions/Other_software I use it once. Anthony On Thu, Nov 12, 2009 at 7:49 PM, Mark Abraham wrote: > ms wrote: >> >> Hi, >> >> I wonder if there is an easy way I am missing to get

Re: [gmx-users] Density histogram in Ramachandran plot

2009-11-12 Thread Mark Abraham
ms wrote: Hi, I wonder if there is an easy way I am missing to get a density histogram from the Ramachandran plot over a trajectory as outputted by g_rama. All I see are big, uniform black blobs and they're not helpful, because with tons of data points a density plot would be much more informati

[gmx-users] Density histogram in Ramachandran plot

2009-11-12 Thread ms
Hi, I wonder if there is an easy way I am missing to get a density histogram from the Ramachandran plot over a trajectory as outputted by g_rama. All I see are big, uniform black blobs and they're not helpful, because with tons of data points a density plot would be much more informative. Thanks!