Re: [gmx-users] Error gmxtest

2008-04-07 Thread Justin A. Lemkul
Have a look here: http://www.gromacs.org/pipermail/gmx-users/2007-November/030491.html Perhaps try downloading the new version and re-compiling. -Justin Quoting Nadia Gro <[EMAIL PROTECTED]>: > Dear David, > > while ERROR for dec+water complex test is clear, I do not know what to make > of t

Re: [gmx-users] Error gmxtest

2008-04-07 Thread Nadia Gro
Dear David, while ERROR for dec+water complex test is clear, I do not know what to make of this one: FAILED. Check files in acetonitrilRF from /gmxtest/complex/acetonitrilRF/md.log: Initializing LINear Constraint Solver number of constraints is 526 average number of constraints coupled to

Re: [gmx-users] Error gmxtest

2008-04-02 Thread David van der Spoel
Nadia Gro wrote: (if test -d "gmxtest"; then cd "gmxtest"; ./gmxtest.pl all; cd ..; \ else echo "No gmxtest directory found. Please download and unpack it here.";\ fi) No gmxtest directory found. Please download and unpack it here. So? Do as it say

Re: [gmx-users] Error gmxtest

2008-04-02 Thread Nadia Gro
> > > > > (if test -d "gmxtest"; then cd "gmxtest"; ./gmxtest.pl all; cd ..; \ > > else echo "No gmxtest directory found. Please download and unpack it > > here.";\ > > fi) > > No gmxtest directory found. Please download and unpack it here. > > > > So? Do as it says... > Sorry, did not realize I c

Re: [gmx-users] Error gmxtest

2008-04-02 Thread David van der Spoel
Nadia Gro wrote: Dear All, I have compiled fftw3_3.0.1 in a specific user directory; then configured, compiled gromacs-3.3.2 according to directions and installed it in the specific directory, all without any errors, but at the end "make tests" command fails, the output is: (if test -d "gmx

[gmx-users] Error gmxtest

2008-04-02 Thread Nadia Gro
Dear All, I have compiled fftw3_3.0.1 in a specific user directory; then configured, compiled gromacs-3.3.2 according to directions and installed it in the specific directory, all without any errors, but at the end "make tests" command fails, the output is: (if test -d "gmxtest"; then cd "gmxtest