Re: [gmx-users] Exceeding of Maximum allowed number of DD cells

2010-01-11 Thread Carsten Kutzner
On Jan 10, 2010, at 4:24 PM, Chao Zhang wrote: Dear GMX-Users, I'm testing my 256 full hydrated lipid on blue gene. The purpose is to find out the right number for -npme, as mdrun can not estimate itself successfully. You might find g_tune_pme useful, which is available in the git

[gmx-users] Exceeding of Maximum allowed number of DD cells

2010-01-10 Thread Chao Zhang
Dear GMX-Users, I'm testing my 256 full hydrated lipid on blue gene. The purpose is to find out the right number for -npme, as mdrun can not estimate itself successfully. I met the problem that how to match the maxinum allowed number for DD cells with large number of CPU cores. My simulation

Re: [gmx-users] Exceeding of Maximum allowed number of DD cells

2010-01-10 Thread Mark Abraham
Chao Zhang wrote: Dear GMX-Users, I'm testing my 256 full hydrated lipid on blue gene. The purpose is to find out the right number for -npme, as mdrun can not estimate itself successfully. I met the problem that how to match the maxinum allowed number for DD cells with large number of CPU