But be aware that the force depends on the pulling velocity. If you
perform the simulation with two different pulling velocities you'll get
two different forces for each distance.
The easiest way to get the force as a function of the distance (without
the bias of the pulling velocity) would be t
16 nov 2012 kl. 22.42 skrev Justin Lemkul:
>
>
> On 11/16/12 10:45 AM, Gmx QA wrote:
>> Hello gmx-users,
>>
>> I've performed a pulling simulation and obtained a force-vs-time plot and a
>> distance-vs-time plot (xvg-files).
>> Is it common to somehow combine these to get a force-vs-distance-p
On 11/16/12 10:45 AM, Gmx QA wrote:
Hello gmx-users,
I've performed a pulling simulation and obtained a force-vs-time plot and a
distance-vs-time plot (xvg-files).
Is it common to somehow combine these to get a force-vs-distance-plot using
a hacked-together script, or how do people that have e
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