: Discussion list for GROMACS users
Sent: Sunday, December 25, 2011 10:58 AM
Subject: Re: [gmx-users] Fw: modifying the mutated DNA parameters
On 12/25/2011 6:04 PM, banafsheh mehrazma wrote:
Dear Mark;
>Thank you for your instant reply. You are right, but in my case, there is a
>residue
On 12/25/2011 6:04 PM, banafsheh mehrazma wrote:
Dear Mark;
Thank you for your instant reply. You are right, but in my case, there
is a residue 8-OxoG (oxidized G). As you know, in all of the force
fields in Gromacs package, G,C,A and T are known. In your opinion,
what should I do in case of
residue?
Thank you
B.Mehrazma
From: banafsheh mehrazma
To: gmx-users@gromacs.org
Sent: Saturday, December 24, 2011 3:11 PM
Subject: [gmx-users] Fw: modifying the mutated DNA parameters
--- On Sat, 12/24/11, banafsheh mehrazma wrote:
>F
On 12/24/2011 10:41 PM, banafsheh mehrazma wrote:
--- On *Sat, 12/24/11, banafsheh mehrazma //* wrote:
From: banafsheh mehrazma
Subject:
To: gmx-users@gromacs.org
Date: Saturday, December 24, 2011, 3:39 AM
To whom it may concern;
I am willing to study a damaged DNA w
--- On Sat, 12/24/11, banafsheh mehrazma wrote:
From: banafsheh mehrazma
Subject:
To: gmx-users@gromacs.org
Date: Saturday, December 24, 2011, 3:39 AM
To whom it may concern;
I am willing to study a damaged DNA which has a 8-oxoG as the lesion (the
Carbon 8 in guannine is oxidized.).
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