Why you don't want to use VMD program? It's very easy to get dihedral angles
from there.
serdar
--- Chih-Ying Lin <[EMAIL PROTECTED]> schrieb am Mi, 2.7.2008:
Von: Chih-Ying Lin <[EMAIL PROTECTED]>
Betreff: [gmx-users] Have read the manual => How to calculate dihe
what does the file angle.ndx mean?
A dihedral angle is specified by 4 atoms; I suppose the index file
should contain list of 4 atoms corresponding to dihedral angles you want
to calculate. Hope this helps.
Sasidhar
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HI
I have read the manual but the thing is that I could not get the
answers from the manuals. So, I repeatly ask the same questions and
if anyone could give me the exact answers. Thanks a lot.
Lin
I use mk_angndx to produce angle.ndx
then, enter g_angle -od angdist.xvg -ov anga
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