Re: [gmx-users] Hi All..one question about charge making

2007-08-30 Thread Mark Abraham
uki zhu wrote: Dear all gmx-users, Sorry to bother you. I am trying to make a molecule with a unit charge well-distributed. But I do not know how to write such *.top file. Does every atom get the same charge at the beginning? And can we use Gromacs to simulate the changes of the charge distrib

[gmx-users] Hi All..one question about charge making

2007-08-30 Thread uki zhu
Dear all gmx-users, Sorry to bother you. I am trying to make a molecule with a unit charge well-distributed. But I do not know how to write such *.top file. Does every atom get the same charge at the beginning? And can we use Gromacs to simulate the changes of the charge distribution? Any help woul