Re: [gmx-users] How to run NPT (anisotropic simulatio) for urea-water system with variable axis only in z direction

2007-01-16 Thread Mark Abraham
Sivashangari Gnanasambandam wrote: Hi, I am trying to study the dissolution of urea in water. After adding the water molecule using genbox, I did the energy minimization by applying pbc. Then I run the equilibration for 300ps using NPT anisotropic pressure coulpling and variable axis only in th

[gmx-users] How to run NPT (anisotropic simulatio) for urea-water system with variable axis only in z direction

2007-01-15 Thread Sivashangari Gnanasambandam
Hi, I am trying to study the dissolution of urea in water. After adding the water molecule using genbox, I did the energy minimization by applying pbc. Then I run the equilibration for 300ps using NPT anisotropic pressure coulpling and variable axis only in the z direction. The reference pressure