Re: [gmx-users] Lipid-protein tuturial by Lemkul

2009-10-16 Thread Justin A. Lemkul
seunghwan lee wrote: Hi I am new to Gromacs and going through some tutorials. I am working on lipid-protein tutorial given by Justin Lemkul and I am stuck with the very first step. When I execute pdb2gmx to generate .top file and .pdb without hydrogen, pdb2gmx -f KALP-15_princ.pdb -o KALP

[gmx-users] Lipid-protein tuturial by Lemkul

2009-10-16 Thread seunghwan lee
Hi I am new to Gromacs and going through some tutorials. I am working on lipid-protein tutorial given by Justin Lemkul and I am stuck with the very first step. When I execute pdb2gmx to generate .top file and .pdb without hydrogen, pdb2gmx -f KALP-15_princ.pdb -o KALP-15_processed.gro -ignh -t