Thanks Justin.
-Original Message-
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org] On
Behalf Of Justin Lemkul
Sent: Thursday, September 26, 2013 7:51 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] Membrane simulation with OPLS ff.
On 9/26
On 26 Sep, 2013, at 19:50, Justin Lemkul wrote:
> On 9/26/13 10:47 PM, Christopher Neale wrote:
>> Dear Karthi:
>>
>> As far as I am aware, there is no OPLSAA lipid force field. I have used
>> Berger lipids with OPLSAA protein
>> ( http://www.pomeslab.com/files/lipidCombinationRules.pdf ) but t
On 9/26/13 10:47 PM, Christopher Neale wrote:
Dear Karthi:
As far as I am aware, there is no OPLSAA lipid force field. I have used Berger
lipids with OPLSAA protein
( http://www.pomeslab.com/files/lipidCombinationRules.pdf ) but that is mixing
a UA lipid with an AA protein
so be aware of pos
Dear Karthi:
As far as I am aware, there is no OPLSAA lipid force field. I have used Berger
lipids with OPLSAA protein
( http://www.pomeslab.com/files/lipidCombinationRules.pdf ) but that is mixing
a UA lipid with an AA protein
so be aware of possible problems arising out of that.
Charmm has pr
Dear GMX users:
Is OPLSAA forcefield data already available for POPC membranes. I am
interested in simulation of proteins in POPC membrane.
Thank you.
Best Regards
Karthi.
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