Ok, you convinced me. I'll really give it a try. I'm following this throw
the suposition that openMP implementation on intel compilers is not as good
as GNU compilers. I already tested intel openMP in our cluster, and it just
sucked in comparison to the pure MPI compilation.
Let's hope I can make
On Fri, Nov 8, 2013 at 12:02 AM, Jones de Andrade wrote:
> Really?
Of course. With openmp gets to use all your cores for PME+bondeds+stuff
while the GPU does PP. Any version without openmp gets to use one core per
domain, which is bad.
> An what about gcc+mpi? should I expect any improvement?
Really? An what about gcc+mpi? should I expect any improvement?
On Thu, Nov 7, 2013 at 6:51 PM, Mark Abraham wrote:
> You will do much better with gcc+openmp than icc-openmp!
>
> Mark
>
>
> On Thu, Nov 7, 2013 at 9:17 PM, Jones de Andrade >wrote:
>
> > Did it a few days ago. Not so much of a pr
You will do much better with gcc+openmp than icc-openmp!
Mark
On Thu, Nov 7, 2013 at 9:17 PM, Jones de Andrade wrote:
> Did it a few days ago. Not so much of a problem here.
>
> But I compiled everything, including fftw, with it. The only error I got
> was that I should turn off the separable c
Did it a few days ago. Not so much of a problem here.
But I compiled everything, including fftw, with it. The only error I got
was that I should turn off the separable compilation, and that the user
must be in the group video.
My settings are (yes, I know it should go better with openmp, but open
icc and CUDA is pretty painful. I'd suggest getting latest gcc.
Mark
On Thu, Nov 7, 2013 at 2:42 PM, wrote:
> Hi,
>
> I'm having trouble compiling v 4.6.3 with GPU support using CUDA 5.5.22.
>
> The configuration runs okay and I have made sure that I have set paths
> correctly.
>
> I'm getting
Hi,
I'm having trouble compiling v 4.6.3 with GPU support using CUDA 5.5.22.
The configuration runs okay and I have made sure that I have set paths
correctly.
I'm getting errors:
$ make
[ 0%] Building NVCC (Device) object
src/gmxlib/cuda_tools/CMakeFiles/cuda_tools.dir//./cuda_tools_generate
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