Hi all, I am trying to create the gromacs topology and gro file, using pdb2gmx, with the Amber99SB-ILDN ff. The problem is that my protein has two chains, but the second one, is a one residue chain, that contains a GLU.
When I try it I obtain: Fatal error: In the chosen force field there is no residue type for 'GLU' as a starting terminus For more information and tips for troubleshooting, please check the GROMACS website at http://www.gromacs.org/Documentation/Errors Some of you knows how to solve it? Thanks in advance -- View this message in context: http://gromacs.5086.x6.nabble.com/Problem-creating-the-gro-file-with-Amber-tp5009640.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
