Dear All,
I am running Gromacs 3.3.1 and I have recently installed dssp to run the
do_dssp command.
I have set the path correctly and the dssp seems to work ok by it self, however
when i run do_dssp I get the following message:
There are 25 residues in your selected group
Opening library file
Hi,
I am trying to use do_dssp to generate a secondary structure map over time for
a 10-ns simulation. I have installed dssp_2.2.0 at the usual /usr/local/bin
I tried running it with the following command line
do_dssp -f md.xtc -s md.tpr -o ss.xpm -sc ss.xvg -dt 100 -tu ps; but ended up
with the
On 8/12/13 4:29 PM, Dipankar Roy wrote:
Hi,
I am trying to use do_dssp to generate a secondary structure map over time for
a 10-ns simulation. I have installed dssp_2.2.0 at the usual /usr/local/bin
I tried running it with the following command line
do_dssp -f md.xtc -s md.tpr -o ss.xpm -sc ss
3 matches
Mail list logo