On Aug 13, 2009, at 21:24, Carla Chiodi wrote:
Hi
Is it possible to simulate the Protein Domain Motion by MD ?
Thank you
Lin
You can do a Coarse-Grained MD using Martini forcefield. You can see
huge domain motions on your protein.
Does not mean it is right!
Regards,
Carla
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Chih-Ying Lin wrote:
Hi
I just check on line that the time scale for the Protein Domain Motion
is micro-seconds.
So, is it possible to simulate the Protein Domain Motion by MD?
Anything is possible, given enough brute computing power. As for whether or not
it's feasible, that's up to y
Hi
I just check on line that the time scale for the Protein Domain Motion is
micro-seconds.
So, is it possible to simulate the Protein Domain Motion by MD?
Thank you
Lin
Chih-Ying Lin wrote:
>
>
> Hi
> Is it possible to simulate the Protein Domain Motion by MD ?
>
Yes, over long time peri
Hi
Is it possible to simulate the Protein Domain Motion by MD ?
Thank you
Lin
You can do a Coarse-Grained MD using Martini forcefield. You can see huge
domain motions on your protein.
Regards,
Carla
___
gmx-users mailing listgmx-users@gromacs.org
htt
Chih-Ying Lin wrote:
Hi
Is it possible to simulate the Protein Domain Motion by MD ?
Yes, over long time periods. Normal Modes Analysis is better suited to this
kind of thing.
-Justin
Thank you
Lin
___
Hi
Is it possible to simulate the Protein Domain Motion by MD ?
Thank you
Lin
___
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