Thanks Berk, although I didn't test it yet, it makes sense. Many thanks.
Alan On Mon, Sep 21, 2009 at 14:10, <gmx-users-requ...@gromacs.org> wrote: > Hi, > > I guess the problem is in src/gmxlib/futil.c, > where several string buffers that contain the path are of size 512. > In Gromacs 4.1 they will be 4096. > You can try replacing all numbers 512 by 4096 in src/gmxlib/futil.c. > > Berk > >> From: alanwil...@gmail.com >> Date: Mon, 21 Sep 2009 13:59:54 +0100 >> To: gmx-users@gromacs.org >> Subject: [gmx-users] problems trying to run gmx with the size of $PATH >> >> Hi There, >> >> I use Mac OSX 10.6.1 kernel 64 bits with Fink 64 bits. >> >> I have a long $PATH, with several paths for several applications. If I >> try 'grompp', is gives: >> >> grompp >> :-) G R O M A C S (-: >> >> [1] 33088 abort grompp >> >> It also happens if running SLeopard kernel 32 bits. >> >> When I made my path shorter (keeping just the essential /usr/bin, >> /sw/bin, /usr/local/bin etc.), 'grompp' worked fine. >> >> Does anyone know if there's a limit for $PATH? or why gromacs in >> particular would be affected? Because so far I got only gromacs >> complaining and even though when I was using 10.5.8 (Leopard, 32 bits) >> my $PATH was as big as it is and I didn't have problem then. >> >> Many thanks in advance, >> >> Alan >> _______________________________________________ _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
