Re: [gmx-users] Re: Re: Re: Re: umbrella potential

2009-09-27 Thread Justin A. Lemkul
Stefan Hoorman wrote: Ok Justin, here are both profile and histogram files. Please let me know if you can't get access or something like this. I have never used this protobucket before. "http://i784.photobucket.com/albums/yy123/stefhoor/wham_stefhoor/profile.jpg"; "http://i784.photobucket.co

[gmx-users] Re: Re: Re: Re: umbrella potential

2009-09-27 Thread Stefan Hoorman
2009/9/26 > Send gmx-users mailing list submissions to >gmx-users@gromacs.org > > To subscribe or unsubscribe via the World Wide Web, visit >http://lists.gromacs.org/mailman/listinfo/gmx-users > or, via email, send a message with subject or body 'help' to >gmx-users-requ..

Re: [gmx-users] Re: Re: Re: Re: umbrella potential

2009-09-21 Thread Justin A. Lemkul
Stefan Hoorman wrote: I am starting again my calculations for the real system and this am going to use as starting positions distances in intervals of 0.1nm. Some of them aren't really 0.1nm apart since the distance between the twogroups in my first trajectory does not always increase in a s

[gmx-users] Re: Re: Re: Re: umbrella potential

2009-09-21 Thread Stefan Hoorman
2009/9/21 > Send gmx-users mailing list submissions to >gmx-users@gromacs.org > > To subscribe or unsubscribe via the World Wide Web, visit > > > Stefan Hoorman wrote: > > > I have a test set which is comprised of the same constituents of my real > > system, except the solvent (i mean, it