Re: [gmx-users] Re: modify bondfree.c and recompile

2008-10-22 Thread Mark Abraham
Jian Zou wrote: Hi Mark, David and Bess, Thank you all for the suggestions. I know the dependency has to be somewhere in the Makefiles or the files they include but I cannot find it. What I am doing is simply "make" under top-level source directory followed by make install. In this case, the c

RE: [gmx-users] Re: modify bondfree.c and recompile

2008-10-22 Thread Berk Hess
relink everything. If you only type make (mdrun) in kernel, you new potential will not be in there. Typing make in src or the top level dir is always safe. Berk > Date: Wed, 22 Oct 2008 10:06:44 -0400 > From: [EMAIL PROTECTED] > To: gmx-users@gromacs.org > Subject: [gmx-users] Re: modif

[gmx-users] Re: modify bondfree.c and recompile

2008-10-22 Thread Jian Zou
Hi Mark, David and Bess, Thank you all for the suggestions. I know the dependency has to be somewhere in the Makefiles or the files they include but I cannot find it. What I am doing is simply "make" under top-level source directory followed by make install. In this case, the content of all the