Re: [gmx-users] Re: specifying the direction of Pull in US

2012-07-07 Thread Justin A. Lemkul
On 7/7/12 12:15 AM, Raj wrote: Thanks for ur suggestion Justin, I'm facing trouble in setting that vector, actually I cant figure out how can i set up a vector. Is there any easier way with which i can set up a vector. Thanks It can be set simply to the difference in the (x,y,z) coordinates

[gmx-users] Re: specifying the direction of Pull in US

2012-07-06 Thread Raj
Thanks for ur suggestion Justin, I'm facing trouble in setting that vector, actually I cant figure out how can i set up a vector. Is there any easier way with which i can set up a vector. Thanks -- View this message in context: http://gromacs.5086.n6.nabble.com/specifying-the-direction-of-Pull-i

Re: [gmx-users] Re: specifying the direction of Pull in US

2012-07-06 Thread Justin A. Lemkul
On 7/6/12 9:52 AM, Raj wrote: hi , When i applied distance I cant have control over the direction of the pull. The ligand is not exactly pulled along the direction i meant to pull You can specify the pull vector using the difference between the COM positions of the pull group and its refer

[gmx-users] Re: specifying the direction of Pull in US

2012-07-06 Thread Raj
hi , When i applied distance I cant have control over the direction of the pull. The ligand is not exactly pulled along the direction i meant to pull -- View this message in context: http://gromacs.5086.n6.nabble.com/specifying-the-direction-of-Pull-in-US-tp4999140p4999155.html Sent from the GRO