[gmx-users] Re:g_mindist option

2008-08-26 Thread alkasrivastava
Hi I am doing a 5 peptide simulation in a 6nm box. Now to check the correctness of my simulation i m calculating the minimum periodic distance using g_mindist to find out the distance between molecule and its periodic images.Following is the command i have used g_mindist -s full.tpr -f full.xtc

Re: [gmx-users] Re:g_mindist option

2008-08-26 Thread Justin A. Lemkul
[EMAIL PROTECTED] wrote: Hi I am doing a 5 peptide simulation in a 6nm box. Now to check the correctness of my simulation i m calculating the minimum periodic distance using g_mindist to find out the distance between molecule and its periodic images.Following is the command i have used